Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insc for insertion element is2 on f plasmid | SK85_04924 | P0CF49 | Negative | 5089554 - 5089919 | 13452.4 |
| hypothetical protein | SK85_04925 | Not Available | Negative | 5089961 - 5090065 | 3871.56 |
| hypothetical protein | SK85_04926 | Not Available | Positive | 5090595 - 5091047 | 16090.5 |
| protein stbb | SK85_04927 | P11906 | Negative | 5091450 - 5091803 | 13234.9 |
| plasmid segregation protein parm | SK85_04928 | P11904 | Negative | 5091803 - 5092765 | 35767.5 |
| hypothetical protein | SK85_04929 | Q9S4X5 | Positive | 5093277 - 5094203 | 34913.9 |
| hypothetical protein | SK85_04930 | Not Available | Positive | 5094856 - 5095089 | 9010.81 |
| hypothetical protein | SK85_04931 | Not Available | Positive | 5095163 - 5095468 | 11444.6 |
| hypothetical protein | SK85_04932 | Not Available | Negative | 5096230 - 5096907 | 25508.6 |
| hypothetical protein | SK85_04933 | Q00188 | Negative | 5096957 - 5097712 | 28158.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





