Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04914 | Not Available | Positive | 5081762 - 5082025 | 9963.68 |
| hypothetical protein | SK85_04915 | Not Available | Positive | 5082015 - 5082314 | 11545.6 |
| hypothetical protein | SK85_04916 | Not Available | Negative | 5082350 - 5083015 | 25199.3 |
| hypothetical protein | SK85_04917 | P05530 | Negative | 5083585 - 5084148 | 21849.4 |
| protein mcbf | SK85_04918 | P05529 | Negative | 5084152 - 5084883 | 27992.0 |
| hypothetical protein | SK85_04919 | P05528 | Negative | 5084880 - 5085605 | 27802.8 |
| hypothetical protein | SK85_04920 | P23186 | Negative | 5085615 - 5086805 | 44922.6 |
| hypothetical protein | SK85_04921 | P23185 | Negative | 5086786 - 5087604 | 30754.8 |
| hypothetical protein | SK85_04922 | P23184 | Negative | 5087606 - 5088460 | 32745.6 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_04923 | Not Available | Negative | 5088691 - 5089596 | 34400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





