Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trba | SK85_04894 | P18034 | Positive | 5058631 - 5058972 | 12521.8 |
| hypothetical protein | SK85_04895 | P18032 | Negative | 5058953 - 5059288 | 12868.5 |
| protein traq | SK85_04896 | P18033 | Positive | 5059369 - 5059653 | 10830.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | SK85_04897 | P18035 | Positive | 5059640 - 5060185 | 20031.3 |
| conjugal transfer protein trbj | SK85_04898 | P18353 | Positive | 5060175 - 5060489 | 11397.8 |
| hypothetical protein | SK85_04899 | P15068 | Positive | 5060440 - 5060835 | 15473.1 |
| conjugal transfer pilus assembly protein trah | SK85_04900 | P15069 | Positive | 5060822 - 5062195 | 50298.4 |
| conjugal transfer mating pair stabilization protein trag | SK85_04901 | P33790 | Positive | 5062192 - 5065038 | 103216.0 |
| hypothetical protein | SK85_04902 | Not Available | Positive | 5065035 - 5065544 | 19423.3 |
| trat complement resistance protein | SK85_04903 | P13979 | Positive | 5065558 - 5066289 | 25902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





