Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04884 | Not Available | Positive | 5049334 - 5049807 | 18197.2 |
| hypothetical protein | SK85_04885 | Not Available | Negative | 5049853 - 5050314 | 17548.8 |
| protein trac | SK85_04886 | P18004 | Positive | 5050472 - 5053102 | 99249.5 |
| type-f conjugative transfer system protein trbi | SK85_04887 | P18006 | Positive | 5053099 - 5053485 | 14163.0 |
| type-f conjugative transfer system protein traw | SK85_04888 | P18472 | Positive | 5053482 - 5054114 | 23631.7 |
| conjugal transfer pilus assembly protein trau | SK85_04889 | P18471 | Positive | 5054111 - 5055103 | 36697.5 |
| type-f conjugative transfer system pilin assembly protein trbc | SK85_04890 | P18473 | Positive | 5055112 - 5055750 | 23422.2 |
| type-f conjugative transfer system mating-pair stabilization protein tran | SK85_04891 | P24082 | Positive | 5055747 - 5057597 | 66727.2 |
| conjugal transfer protein trbe | SK85_04892 | Q05807 | Positive | 5057624 - 5057881 | 9844.97 |
| type-f conjugative transfer system pilin assembly protein traf | SK85_04893 | P14497 | Positive | 5057874 - 5058617 | 27963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





