Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin | SK85_04874 | P14494 | Positive | 5043923 - 5044285 | 12897.5 |
| type iv conjugative transfer system protein tral | SK85_04875 | P08321 | Positive | 5044300 - 5044611 | 11916.7 |
| protein trae | SK85_04876 | P08322 | Positive | 5044633 - 5045199 | 21239.6 |
| type-f conjugative transfer system secretin trak | SK85_04877 | P41066 | Positive | 5045186 - 5045914 | 25628.6 |
| protein trab | SK85_04878 | P41067 | Positive | 5045914 - 5047341 | 50461.9 |
| conjugal transfer protein trap | SK85_04879 | P41068 | Positive | 5047331 - 5047921 | 22020.7 |
| conjugal transfer protein trbd | SK85_04880 | P41070 | Positive | 5047908 - 5048228 | 11561.1 |
| hypothetical protein | SK85_04881 | P41072 | Positive | 5048240 - 5048473 | 8499.04 |
| protein trav | SK85_04882 | P41069 | Positive | 5048470 - 5048985 | 18236.0 |
| conjugal transfer protein trar | SK85_04883 | P41065 | Positive | 5049120 - 5049341 | 8313.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





