Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-q trna(asp) synthetase | SK85_00144 | C4ZRN7 | Negative | 163899 - 164825 | 34869.5 |
| rna polymerase-binding transcription factor dksa | SK85_00145 | P0ABS3 | Negative | 164862 - 165317 | 17528.7 |
| sugar fermentation stimulation protein a | SK85_00146 | A7ZHN7 | Negative | 165495 - 166199 | 26230.2 |
| 2'-5'-rna ligase | SK85_00147 | P37025 | Negative | 166214 - 166744 | 19935.0 |
| atp-dependent rna helicase hrpb | SK85_00148 | P37024 | Positive | 166818 - 169247 | 89109.1 |
| penicillin-binding protein 1b | SK85_00149 | P02919 | Positive | 169443 - 171977 | 94298.0 |
| ferrichrome-iron receptor | SK85_00150 | P06971 | Positive | 172197 - 174440 | 82186.5 |
| iron(3+)-hydroxamate import atp-binding protein fhuc | SK85_00151 | P07821 | Positive | 174491 - 175288 | 28888.2 |
| iron(3+)-hydroxamate-binding protein fhud | SK85_00152 | P07822 | Positive | 175288 - 176178 | 33030.3 |
| iron(3+)-hydroxamate import system permease fhub | SK85_00153 | P06972 | Positive | 176175 - 178157 | 70412.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





