Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein psib | SK85_04864 | P10032 | Positive | 5037192 - 5037626 | 15832.7 |
| plasmid sos inhibition protein a | SK85_04865 | P18148 | Positive | 5037623 - 5038342 | 27659.8 |
| hypothetical protein | SK85_04866 | Not Available | Positive | 5038306 - 5038653 | 13055.5 |
| stable plasmid inheritance protein | SK85_04867 | Not Available | Positive | 5038804 - 5039019 | 7985.58 |
| hypothetical protein | SK85_04868 | Not Available | Positive | 5039873 - 5040169 | 10986.1 |
| phage protein | SK85_04869 | P18005 | Positive | 5040279 - 5041100 | 31685.8 |
| x polypeptide | SK85_04870 | P14499 | Negative | 5041397 - 5041906 | 19336.4 |
| relaxosome protein tram | SK85_04871 | P33787 | Positive | 5042320 - 5042703 | 14498.3 |
| hypothetical protein | SK85_04872 | P33785 | Positive | 5042895 - 5043542 | 25074.8 |
| conjugal transfer protein tray | SK85_04873 | P10512 | Positive | 5043662 - 5043889 | 8808.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





