Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein | SK85_04854 | Q9S4W7 | Positive | 5029001 - 5029426 | 16245.4 |
| hypothetical protein | SK85_04855 | Not Available | Positive | 5029473 - 5029895 | 15721.6 |
| hypothetical protein | SK85_04856 | Not Available | Positive | 5029892 - 5030083 | 7264.75 |
| hypothetical protein | SK85_04857 | Not Available | Positive | 5031158 - 5031388 | 8582.57 |
| hypothetical protein | SK85_04858 | Not Available | Positive | 5031440 - 5032801 | 51821.2 |
| hypothetical protein | SK85_04859 | Not Available | Positive | 5032848 - 5033411 | 21111.6 |
| hypothetical protein | SK85_04860 | Not Available | Positive | 5033411 - 5033665 | 9415.32 |
| plasmid-derived single-stranded dna-binding protein | SK85_04861 | P28045 | Positive | 5034308 - 5034829 | 19116.5 |
| hypothetical protein | SK85_04862 | Q1R1U5 | Positive | 5034885 - 5035118 | 9074.63 |
| chromosome partitioning protein parb | SK85_04863 | Q9ZGR8 | Positive | 5035179 - 5037137 | 71504.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





