Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04844 | Not Available | Positive | 5022955 - 5023176 | 8675.34 |
| hypothetical protein | SK85_04845 | Not Available | Positive | 5023190 - 5023624 | 16004.0 |
| hypothetical protein | SK85_04846 | Not Available | Positive | 5023669 - 5024439 | 28713.5 |
| antirestriction protein | SK85_04847 | Not Available | Positive | 5024855 - 5025280 | 16176.3 |
| hypothetical protein | SK85_04848 | Not Available | Positive | 5025327 - 5025749 | 15576.5 |
| hypothetical protein | SK85_04849 | Not Available | Positive | 5025746 - 5025937 | 7264.75 |
| adenine-specific dna-methyltransferase | SK85_04850 | Q9S4X2 | Positive | 5026417 - 5027100 | 25374.4 |
| hypothetical protein | SK85_04851 | Q9S4X1 | Positive | 5027101 - 5027322 | 8675.34 |
| hypothetical protein | SK85_04852 | O82898 | Positive | 5027336 - 5027770 | 16136.2 |
| hypothetical protein | SK85_04853 | O82899 | Positive | 5027815 - 5028585 | 28699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





