Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yqik | SK85_04824 | Not Available | Negative | 5004362 - 5006056 | 61808.4 |
| hypothetical protein | SK85_04825 | P76657 | Negative | 5006083 - 5006703 | 22314.8 |
| hypothetical protein | SK85_04826 | Not Available | Negative | 5006970 - 5007632 | 24866.8 |
| hypothetical protein | SK85_04827 | Not Available | Negative | 5007773 - 5008414 | 24629.9 |
| replication initiation protein | SK85_04828 | Not Available | Positive | 5009118 - 5009990 | 33219.1 |
| hypothetical protein | SK85_04829 | Not Available | Positive | 5010901 - 5011179 | 10216.1 |
| hypothetical protein | SK85_04830 | Not Available | Positive | 5011179 - 5011454 | 10750.1 |
| hypothetical protein | SK85_04831 | Not Available | Positive | 5011606 - 5012040 | 16687.5 |
| hypothetical protein | SK85_04832 | Not Available | Positive | 5012122 - 5012553 | 15987.4 |
| transposase | SK85_04833 | P50359 | Positive | 5012553 - 5012903 | 13214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





