Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04784 | Not Available | Negative | 4964651 - 4964866 | 7883.23 |
| hypothetical protein | SK85_04785 | Not Available | Negative | 4964870 - 4965238 | 14399.2 |
| hypothetical protein | SK85_04786 | Not Available | Negative | 4965529 - 4965771 | 8865.81 |
| protein pnda | SK85_04787 | P11902 | Positive | 4966101 - 4966253 | 5830.48 |
| hypothetical protein | SK85_04788 | Not Available | Negative | 4966391 - 4967977 | 60856.0 |
| hypothetical protein | SK85_04789 | P05839 | Negative | 4968251 - 4968904 | 25302.9 |
| hypothetical protein | SK85_04790 | Not Available | Negative | 4968992 - 4971157 | 77538.1 |
| hypothetical protein | SK85_04791 | Not Available | Negative | 4971232 - 4971801 | 22103.4 |
| hypothetical protein | SK85_04792 | Not Available | Negative | 4971798 - 4973003 | 42959.2 |
| hypothetical protein | SK85_04793 | Not Available | Negative | 4972961 - 4973581 | 23492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





