Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial-like adhesin protein | SK85_00134 | P37016 | Negative | 154380 - 154976 | 21141.3 |
| fimbrial-like adhesin protein | SK85_00135 | P37017 | Negative | 155003 - 155635 | 21948.0 |
| transposase insc for insertion element is2 | SK85_00136 | Not Available | Positive | 155646 - 156011 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_00137 | Not Available | Positive | 155969 - 156874 | 34371.0 |
| fimbrial-like adhesin protein | SK85_00138 | P37018 | Negative | 156956 - 157525 | 20308.1 |
| outer membrane usher protein htre | SK85_00139 | P33129 | Negative | 157542 - 160139 | 95504.6 |
| chaperone ecpd | SK85_00140 | P33128 | Negative | 160174 - 160914 | 27055.3 |
| fimbrial-like adhesin protein | SK85_00141 | P37050 | Negative | 161012 - 161596 | 20118.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | SK85_00142 | P26281 | Negative | 161966 - 162445 | 18079.8 |
| poly(a) polymerase i | SK85_00143 | P0ABF3 | Negative | 162442 - 163806 | 52551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





