Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04764 | Not Available | Positive | 4946604 - 4946993 | 14802.4 |
| hypothetical protein | SK85_04765 | P37415 | Positive | 4946990 - 4947916 | 35511.1 |
| hypothetical protein | SK85_04766 | Not Available | Positive | 4947979 - 4948161 | 6860.28 |
| hypothetical protein | SK85_04767 | Not Available | Negative | 4948192 - 4948443 | 9836.78 |
| hypothetical protein | SK85_04768 | Not Available | Positive | 4949024 - 4949872 | 32201.6 |
| hypothetical protein | SK85_04769 | Not Available | Negative | 4949958 - 4950293 | 12476.8 |
| hypothetical protein | SK85_04770 | Not Available | Positive | 4950526 - 4950858 | 12731.3 |
| hypothetical protein | SK85_04771 | P22898 | Positive | 4950870 - 4953581 | 104602.0 |
| hypothetical protein | SK85_04772 | Not Available | Positive | 4953685 - 4954080 | 14592.4 |
| hypothetical protein | SK85_04773 | Not Available | Positive | 4954623 - 4955138 | 18884.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





