Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04754 | Not Available | Negative | 4938726 - 4939247 | 18378.9 |
| plasmid-derived single-stranded dna-binding protein | SK85_04755 | Not Available | Positive | 4939306 - 4939833 | 19274.7 |
| hypothetical protein | SK85_04756 | Q5J3W6 | Positive | 4939891 - 4940124 | 9171.75 |
| chromosome partitioning protein parb | SK85_04757 | Q9S4W2 | Positive | 4940183 - 4942141 | 71523.9 |
| protein psib | SK85_04758 | Not Available | Positive | 4942196 - 4942630 | 15785.9 |
| plasmid sos inhibition protein a | SK85_04759 | Not Available | Positive | 4942627 - 4943346 | 27693.0 |
| hypothetical protein | SK85_04760 | Not Available | Positive | 4943343 - 4943939 | 22115.8 |
| hypothetical protein | SK85_04761 | Not Available | Positive | 4944401 - 4944901 | 19221.8 |
| hypothetical protein | SK85_04762 | Not Available | Positive | 4945634 - 4946068 | 16537.6 |
| hypothetical protein | SK85_04763 | Not Available | Positive | 4946161 - 4946427 | 10453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





