Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase | SK85_04744 | A7ZVT7 | Positive | 4930365 - 4931012 | 24066.7 |
| right origin-binding protein | SK85_04745 | P0ACI1 | Negative | 4931009 - 4931878 | 33146.8 |
| crea protein | SK85_04746 | P0AE93 | Positive | 4932089 - 4932562 | 17108.8 |
| transcriptional regulatory protein creb | SK85_04747 | P08368 | Positive | 4932575 - 4933264 | 26128.7 |
| sensor protein crec | SK85_04748 | P08401 | Positive | 4933264 - 4934688 | 52276.4 |
| inner membrane protein cred | SK85_04749 | P08369 | Positive | 4934746 - 4936098 | 49958.0 |
| aerobic respiration control protein arca | SK85_04750 | P0A9Q3 | Negative | 4936158 - 4936874 | 27293.6 |
| rrna methyltransferase | SK85_04751 | P37005 | Positive | 4937510 - 4938196 | 25360.7 |
| hypothetical protein | SK85_04752 | O82902 | Positive | 4938221 - 4938346 | 4421.12 |
| hypothetical protein | SK85_04753 | Not Available | Positive | 4938343 - 4938534 | 7264.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





