Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically-inducible protein y | SK85_04724 | P0AFH9 | Positive | 4909140 - 4909745 | 21074.8 |
| hypothetical protein | SK85_04725 | A7ZVR8 | Positive | 4909872 - 4910033 | 5536.27 |
| esterase | SK85_04726 | P39407 | Positive | 4910155 - 4911228 | 39834.1 |
| dnase | SK85_04727 | P39408 | Positive | 4911225 - 4912007 | 28962.8 |
| yjjw family glycine radical enzyme activase | SK85_04728 | P39409 | Negative | 4912322 - 4913026 | 25603.1 |
| yjji family glycine radical enzyme | SK85_04729 | P37342 | Negative | 4913157 - 4914707 | 58015.2 |
| deoxyribose-phosphate aldolase | SK85_04730 | A7ZVS4 | Positive | 4914965 - 4915744 | 27749.3 |
| thymidine phosphorylase | SK85_04731 | A7ZVS5 | Positive | 4915871 - 4917193 | 47182.9 |
| phosphopentomutase | SK85_04732 | A7ZVS6 | Positive | 4917245 - 4918468 | 44372.4 |
| purine nucleoside phosphorylase deod-type | SK85_04733 | A7ZVS7 | Positive | 4918548 - 4919267 | 25951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





