Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SK85_04714 | P0ADD8 | Positive | 4901524 - 4902249 | 27093.7 |
| transcriptional activator protein bglj | SK85_04715 | P39404 | Positive | 4902207 - 4902884 | 25535.0 |
| ferric iron reductase fhuf | SK85_04716 | P39405 | Negative | 4902923 - 4903711 | 29977.2 |
| hypothetical protein | SK85_04717 | P55914 | Positive | 4903852 - 4904088 | 8719.51 |
| Trna-leu | Not Available | Not Available | Positive | 4904127 - 4904213 | Not Available |
| ribosomal rna small subunit methyltransferase c | SK85_04719 | B7MNC1 | Negative | 4904413 - 4905444 | 37626.8 |
| dna polymerase iii subunit psi | SK85_04720 | P28632 | Positive | 4905547 - 4905960 | 15208.3 |
| ribosomal-protein-alanine acetyltransferase | SK85_04721 | P0A946 | Positive | 4905929 - 4906375 | 16637.7 |
| pyrimidine 5'-nucleotidase yjjg | SK85_04722 | P0A8Y2 | Positive | 4906390 - 4907067 | 25291.0 |
| peptide chain release factor 3 | SK85_04723 | A7ZVR5 | Positive | 4907131 - 4908747 | 60691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





