Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease syme | SK85_04694 | B7NVB3 | Negative | 4876288 - 4876629 | 12294.8 |
| hypothetical protein | SK85_04695 | P05719 | Negative | 4876857 - 4878275 | 53309.1 |
| type i restriction enzyme ecoki m protein | SK85_04696 | P08957 | Negative | 4878272 - 4879861 | 59257.6 |
| type i restriction enzyme ecoki r protein | SK85_04697 | P08956 | Negative | 4879938 - 4883450 | 134132.0 |
| mrr restriction system protein | SK85_04698 | P24202 | Positive | 4883638 - 4884552 | 33565.8 |
| gtpase | SK85_04699 | P24203 | Negative | 4884598 - 4885554 | 35694.9 |
| hypothetical protein | SK85_04700 | P0ADD0 | Negative | 4885565 - 4885768 | 7729.24 |
| inner membrane protein yjiy | SK85_04701 | P39396 | Negative | 4885818 - 4887968 | 77314.5 |
| methyl-accepting chemotaxis protein i | SK85_04702 | P02942 | Positive | 4888345 - 4890009 | 59827.9 |
| l-galactonate transporter | SK85_04703 | P39398 | Negative | 4890058 - 4891419 | 49446.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





