Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein irad | SK85_04674 | A7ZVM4 | Positive | 4858502 - 4858894 | 14747.7 |
| hth-type transcriptional regulator yjie | SK85_04675 | P39376 | Negative | 4858887 - 4859798 | 34797.7 |
| isoaspartyl dipeptidase | SK85_04676 | P39377 | Negative | 4859863 - 4861035 | 41069.3 |
| inner membrane protein yjig | SK85_04677 | P0AEI0 | Negative | 4861048 - 4861509 | 16194.5 |
| inner membrane protein | SK85_04678 | P39379 | Negative | 4861506 - 4862189 | 23854.9 |
| rna 2'-phosphotransferase | SK85_04679 | A7ZVN0 | Positive | 4862439 - 4862993 | 20530.7 |
| inner membrane protein | SK85_04680 | P39381 | Negative | 4863006 - 4864184 | 41333.1 |
| hypothetical protein | SK85_04681 | A1AJL2 | Negative | 4864252 - 4865223 | 35996.4 |
| hypothetical protein | SK85_04682 | P0DN74 | Negative | 4865177 - 4865434 | 9554.6 |
| atpase | SK85_04683 | P39383 | Negative | 4865431 - 4866198 | 27236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





