Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase 2 | SK85_00124 | P61517 | Negative | 145385 - 146047 | 25098.2 |
| abc transporter atp-binding protein | SK85_00125 | P36879 | Positive | 146156 - 147082 | 34649.2 |
| inner membrane transport permease yadh | SK85_00126 | P0AFN8 | Positive | 147079 - 147849 | 28517.9 |
| pts system ascorbate-specific iia component | SK85_00127 | Not Available | Positive | 147954 - 148394 | 16541.0 |
| polysaccharide deacetylase lipoprotein | SK85_00128 | P31666 | Positive | 148458 - 149687 | 46317.7 |
| aspartate 1-decarboxylase | SK85_00129 | A7ZHM0 | Negative | 149691 - 150071 | 13834.5 |
| transposase | SK85_00130 | P31665 | Positive | 150345 - 151247 | 34608.9 |
| pantothenate synthetase | SK85_00131 | A7ZHM3 | Negative | 151321 - 152172 | 31599.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SK85_00132 | C4ZRM7 | Negative | 152184 - 152978 | 28239.1 |
| fimbrial-like adhesin protein | SK85_00133 | P31058 | Negative | 153092 - 154330 | 44901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





