Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose phosphate aldolase | SK85_04634 | B7MMH7 | Positive | 4819127 - 4819768 | 23199.2 |
| hypothetical protein | SK85_04635 | Not Available | Positive | 4819872 - 4820876 | 35800.6 |
| transcriptional regulator | SK85_04636 | P39356 | Negative | 4820917 - 4821903 | 36113.8 |
| hypothetical protein | SK85_04637 | P39357 | Negative | 4822250 - 4823599 | 47006.8 |
| dehydratase | SK85_04638 | P39358 | Negative | 4823706 - 4825673 | 69960.9 |
| dihydrodipicolinate synthase | SK85_04639 | P39359 | Negative | 4825684 - 4826643 | 34883.1 |
| transcriptional regulator | SK85_04640 | P39360 | Negative | 4826594 - 4827382 | 29892.4 |
| transcriptional regulator | SK85_04641 | P39361 | Negative | 4827685 - 4828467 | 29241.3 |
| protein sgce | SK85_04642 | P39362 | Negative | 4828484 - 4829116 | 23201.7 |
| pts system eiia component | SK85_04643 | P39363 | Negative | 4829128 - 4829559 | 15609.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





