Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease lptf | SK85_04624 | Not Available | Positive | 4809540 - 4810640 | 40360.1 |
| lipopolysaccharide export system permease lptg | SK85_04625 | P0ADC7 | Positive | 4810640 - 4811722 | 39621.0 |
| hypothetical protein | SK85_04626 | P39342 | Negative | 4811883 - 4812251 | 13122.7 |
| atpase | SK85_04627 | Not Available | Negative | 4812324 - 4813385 | 38691.8 |
| aldehyde reductase ahr | SK85_04628 | P27250 | Negative | 4813515 - 4814534 | 36575.1 |
| Trna-leu | Not Available | Not Available | Positive | 4814730 - 4814814 | Not Available |
| transposase | SK85_04630 | Not Available | Positive | 4815843 - 4816169 | 12644.0 |
| transposase | SK85_04631 | Not Available | Positive | 4816169 - 4817056 | 33679.1 |
| 5-methylthioribose kinase | SK85_04632 | B7MMH5 | Positive | 4817189 - 4817971 | 30018.6 |
| methylthioribose-1-phosphate isomerase | SK85_04633 | B7MMH6 | Positive | 4817981 - 4819096 | 40407.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





