Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-6-phosphate hydrolase | SK85_04604 | P28904 | Negative | 4786733 - 4788388 | 63889.1 |
| pts system trehalose-specific eiibc component | SK85_04605 | P36672 | Negative | 4788438 - 4789859 | 51105.0 |
| hth-type transcriptional regulator trer | SK85_04606 | P36673 | Negative | 4789978 - 4790925 | 34591.8 |
| magnesium-transporting atpase, p-type 1 | SK85_04607 | P0ABB9 | Positive | 4791304 - 4794000 | 99444.2 |
| enamine/imine deaminase | SK85_04608 | P0AF94 | Negative | 4794206 - 4794592 | 13612.3 |
| aspartate carbamoyltransferase regulatory chain | SK85_04609 | A7ZVC6 | Negative | 4794665 - 4795126 | 17121.6 |
| aspartate carbamoyltransferase catalytic chain | SK85_04610 | A7ZVC7 | Negative | 4795139 - 4796074 | 34419.3 |
| rutc family protein yjgh | SK85_04611 | P39332 | Negative | 4796493 - 4796888 | 14591.0 |
| cyclic-di-gmp-binding biofilm dispersal mediator protein | SK85_04612 | P39333 | Negative | 4797019 - 4797732 | 24599.7 |
| hth-type transcriptional repressor bdcr | SK85_04613 | P39334 | Positive | 4797882 - 4798397 | 18452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





