Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | SK85_04594 | Q6BEX0 | Positive | 4774838 - 4776340 | 55262.4 |
| inner membrane abc transporter permease ytft | SK85_04595 | P39328 | Positive | 4776354 - 4777376 | 35514.1 |
| inner membrane abc transporter permease yjff | SK85_04596 | P37772 | Positive | 4777363 - 4778358 | 35008.0 |
| fructose-1,6-bisphosphatase class 1 | SK85_04597 | A7ZVB0 | Negative | 4778391 - 4779389 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SK85_04598 | P37773 | Positive | 4779565 - 4780938 | 49881.0 |
| ribosome-associated protein | SK85_04599 | A7ZVB3 | Negative | 4781094 - 4781645 | 21360.5 |
| protein pmba | SK85_04600 | P0AFK1 | Positive | 4781739 - 4783091 | 48370.4 |
| soluble cytochrome b562 | SK85_04601 | P0ABE7 | Positive | 4783146 - 4783532 | 14034.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | SK85_04602 | P0A9N9 | Negative | 4783577 - 4784041 | 17490.9 |
| anaerobic ribonucleoside-triphosphate reductase | SK85_04603 | P28903 | Negative | 4784201 - 4786339 | 79999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





