Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-(acyl-carrier-protein) reductase | SK85_04574 | Q9X248 | Negative | 4751972 - 4752763 | 28450.5 |
| tetr family transcriptional regulator | SK85_04575 | P39309 | Positive | 4752976 - 4753623 | 24757.7 |
| cell envelope opacity-associated protein | SK85_04576 | P39310 | Negative | 4753607 - 4754245 | 23520.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SK85_04577 | P0A9L3 | Positive | 4754464 - 4755084 | 22216.5 |
| d-serine/d-alanine/glycine transporter | SK85_04578 | P0AAE1 | Positive | 4755393 - 4756805 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | SK85_04579 | A7ZV87 | Negative | 4756850 - 4757512 | 24884.1 |
| inner membrane protein ytff | SK85_04580 | P39314 | Negative | 4757620 - 4758585 | 35251.6 |
| quinone oxidoreductase 2 | SK85_04581 | P39315 | Negative | 4758694 - 4759554 | 29898.5 |
| transcriptional regulator | SK85_04582 | P0ACN2 | Positive | 4759643 - 4760023 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | SK85_04583 | P08331 | Negative | 4760146 - 4762089 | 70816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





