Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00114 | Not Available | Positive | 133928 - 134080 | 5157.39 |
| hypothetical protein | SK85_00115 | P36682 | Negative | 134077 - 134637 | 19771.7 |
| aconitate hydratase 2 | SK85_00116 | P36683 | Positive | 134992 - 137589 | 93503.4 |
| hypothetical protein | SK85_00117 | A7ZHK8 | Positive | 137765 - 138127 | 13942.3 |
| s-adenosylmethionine decarboxylase proenzyme | SK85_00118 | A7ZHK9 | Negative | 138165 - 138959 | 30386.3 |
| spermidine synthase | SK85_00119 | A7ZHL0 | Negative | 138975 - 139841 | 32323.2 |
| hypothetical protein | SK85_00120 | P0AA96 | Negative | 139947 - 140255 | 11325.4 |
| blue copper oxidase cueo | SK85_00121 | P36649 | Positive | 140460 - 142010 | 56559.6 |
| quinoprotein glucose dehydrogenase | SK85_00122 | P15877 | Negative | 142212 - 144602 | 86752.1 |
| hypoxanthine phosphoribosyltransferase | SK85_00123 | P0A9M3 | Positive | 144808 - 145344 | 20116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





