Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal replication protein n | SK85_04564 | A7ZV72 | Positive | 4742689 - 4743003 | 11472.9 |
| 30s ribosomal protein s18 | SK85_04565 | A8AMJ6 | Positive | 4743008 - 4743235 | 8986.94 |
| 50s ribosomal protein l9 | SK85_04566 | A7ZV74 | Positive | 4743277 - 4743726 | 15770.0 |
| hypothetical protein | SK85_04567 | P43020 | Negative | 4743840 - 4744811 | 35967.6 |
| c4-dicarboxylate permease | SK85_04568 | P40800 | Negative | 4744864 - 4746165 | 45914.5 |
| hypothetical protein | SK85_04569 | Not Available | Negative | 4746208 - 4746684 | 17452.3 |
| oxidoreductase | SK85_04570 | Q9X8N8 | Negative | 4746705 - 4748786 | 76117.5 |
| acetyl-coa:acetoacetyl-coa transferase | SK85_04571 | P37766 | Negative | 4748783 - 4750324 | 55652.8 |
| enoyl-coa hydratase/isomerase | SK85_04572 | A4YI89 | Negative | 4750334 - 4751110 | 28586.5 |
| hypothetical protein | SK85_04573 | Not Available | Negative | 4751120 - 4751962 | 30965.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





