Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator ular | SK85_04554 | A7ZV62 | Negative | 4734868 - 4735623 | 27603.6 |
| l-ascorbate 6-phosphate lactonase | SK85_04555 | A7ZV63 | Negative | 4735731 - 4736795 | 40062.7 |
| ascorbate-specific permease iic component ulaa | SK85_04556 | Q8FAJ3 | Positive | 4737150 - 4738547 | 50735.6 |
| ascorbate-specific phosphotransferase enzyme iib component | SK85_04557 | Q8FAJ1 | Positive | 4738563 - 4738868 | 10838.2 |
| ascorbate-specific phosphotransferase enzyme iia component | SK85_04558 | P69821 | Positive | 4738878 - 4739342 | 17224.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | SK85_04559 | A7ZV66 | Positive | 4739356 - 4740006 | 23650.4 |
| l-ribulose-5-phosphate 3-epimerase ulae | SK85_04560 | A7ZV68 | Positive | 4740016 - 4740870 | 32050.4 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SK85_04561 | C4ZR75 | Positive | 4740870 - 4741556 | 25309.2 |
| hypothetical protein | SK85_04562 | P0AF88 | Negative | 4741685 - 4741960 | 10149.9 |
| 30s ribosomal protein s6 | SK85_04563 | A7ZV71 | Positive | 4742287 - 4742682 | 15187.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





