Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04544 | P0AF77 | Positive | 4727303 - 4727704 | 14905.8 |
| transcriptional regulator effector protein | SK85_04545 | P0AF79 | Positive | 4727723 - 4728421 | 25335.0 |
| hypothetical protein | SK85_04546 | P39293 | Positive | 4728472 - 4729131 | 25010.3 |
| inner membrane protein | SK85_04547 | P0AF81 | Positive | 4729149 - 4729547 | 14224.7 |
| hypothetical protein | SK85_04548 | P39295 | Positive | 4729557 - 4730195 | 23406.0 |
| synthetase/amidase | SK85_04549 | P33222 | Positive | 4730198 - 4731361 | 45025.9 |
| isovaleryl coa dehydrogenase | SK85_04550 | P33224 | Positive | 4731445 - 4733070 | 60608.5 |
| hypothetical protein | SK85_04551 | P0AF84 | Negative | 4733187 - 4733462 | 9949.64 |
| lipoprotein bsma | SK85_04552 | P39297 | Negative | 4733611 - 4733940 | 12038.7 |
| esterase | SK85_04553 | P39298 | Positive | 4734122 - 4734871 | 27545.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





