Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein blc | SK85_04514 | P0A902 | Negative | 4694582 - 4695115 | 19852.7 |
| beta-lactamase | SK85_04515 | P00811 | Negative | 4695204 - 4696337 | 41542.8 |
| fumarate reductase subunit d | SK85_04516 | B7UPX3 | Negative | 4696400 - 4696759 | 13107.8 |
| fumarate reductase subunit c | SK85_04517 | A7ZV25 | Negative | 4696770 - 4697165 | 15015.8 |
| fumarate reductase iron-sulfur subunit | SK85_04518 | P0AC49 | Negative | 4697176 - 4697910 | 27124.5 |
| fumarate reductase flavoprotein subunit | SK85_04519 | P00363 | Negative | 4697903 - 4699711 | 65975.5 |
| elongation factor p-(r)-beta-lysine ligase | SK85_04520 | A7ZV28 | Positive | 4700036 - 4701013 | 36978.1 |
| inner membrane transporter yjem | SK85_04521 | P39282 | Positive | 4701277 - 4702734 | 53050.9 |
| hypothetical protein | SK85_04522 | P39283 | Positive | 4702786 - 4703100 | 11819.2 |
| inner membrane protein yjeo | SK85_04523 | P39284 | Positive | 4703109 - 4703411 | 12193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





