Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yjeh | SK85_04504 | P39277 | Negative | 4686550 - 4687806 | 44780.2 |
| chaperonin | SK85_04505 | A7ZV11 | Positive | 4688082 - 4688375 | 10387.6 |
| chaperonin | SK85_04506 | A1AJ51 | Positive | 4688419 - 4690065 | 57332.4 |
| hypothetical protein | SK85_04507 | P0AF71 | Positive | 4690202 - 4690555 | 11959.2 |
| hypothetical protein | SK85_04508 | P39279 | Negative | 4690758 - 4691627 | 32948.9 |
| l-lysine 2,3-aminomutase | SK85_04509 | P39280 | Negative | 4692022 - 4693050 | 38751.9 |
| elongation factor p | SK85_04510 | A7ZV18 | Positive | 4693092 - 4693658 | 20592.4 |
| entericidin a | SK85_04511 | P0ADB6 | Positive | 4693710 - 4693835 | 4359.48 |
| entericidin b | SK85_04512 | P0ADB9 | Positive | 4693946 - 4694092 | 4809.81 |
| quaternary ammonium compound-resistance protein suge | SK85_04513 | Q8XDQ5 | Positive | 4694268 - 4694585 | 10901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





