Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase i | SK85_04494 | Not Available | Negative | 4674518 - 4678033 | 131746.0 |
| hypothetical protein | SK85_04495 | Not Available | Negative | 4678173 - 4678325 | 5870.27 |
| phage integrase | SK85_04496 | Not Available | Negative | 4678485 - 4679747 | 47779.8 |
| Trna-phe | Not Available | Not Available | Positive | 4679945 - 4680020 | Not Available |
| hth-type transcriptional regulator yjdc | SK85_04498 | P0ACU8 | Negative | 4680127 - 4680702 | 21932.3 |
| thiol:disulfide interchange protein dsbd | SK85_04499 | P36655 | Negative | 4680739 - 4682436 | 61798.7 |
| divalent-cation tolerance protein cuta | SK85_04500 | A7ZV06 | Negative | 4682412 - 4682750 | 12331.7 |
| anaerobic c4-dicarboxylate transporter dcua | SK85_04501 | P0ABN7 | Negative | 4682866 - 4684167 | 45753.5 |
| aspartate ammonia-lyase | SK85_04502 | Q8XDS0 | Negative | 4684285 - 4685721 | 52359.2 |
| inner membrane protein | SK85_04503 | P37147 | Positive | 4686058 - 4686534 | 17693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





