Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SK85_04474 | Not Available | Positive | 4656972 - 4657859 | 33679.1 |
| hypothetical protein | SK85_04475 | Not Available | Positive | 4659132 - 4659698 | 22617.0 |
| hypothetical protein | SK85_04476 | Not Available | Positive | 4659958 - 4660533 | 21949.1 |
| alpa family transcriptional regulator | SK85_04477 | Not Available | Positive | 4660602 - 4660838 | 9067.83 |
| p fimbrial regulatory protein ks71a | SK85_04478 | P62585 | Negative | 4661181 - 4661402 | 8223.93 |
| major pilu subunit operon regulatory protein papb | SK85_04479 | P04744 | Positive | 4661861 - 4662133 | 10176.4 |
| ks71a fimbrillin | SK85_04480 | P04740 | Positive | 4662340 - 4662921 | 19909.4 |
| prs fimbrial minor pilin protein | SK85_04481 | P07111 | Positive | 4662985 - 4663572 | 21879.2 |
| outer membrane usher protein papc | SK85_04482 | Not Available | Positive | 4663622 - 4665124 | 55700.2 |
| transposase insc for insertion element is2 on f plasmid | SK85_04483 | Not Available | Positive | 4665166 - 4665531 | 13452.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





