Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04464 | P0AF60 | Positive | 4647475 - 4647705 | 8550.35 |
| acyltransferase | SK85_04465 | P39274 | Positive | 4647717 - 4647989 | 10468.7 |
| hypothetical protein | SK85_04466 | P0AF62 | Positive | 4648216 - 4648512 | 11468.6 |
| hypothetical protein | SK85_04467 | P64648 | Positive | 4648540 - 4648713 | 6555.44 |
| lysine-trna ligase, heat inducible | SK85_04468 | P0A8N6 | Negative | 4648832 - 4650349 | 57829.9 |
| transporter yjdl | SK85_04469 | P39276 | Negative | 4650586 - 4652043 | 53057.8 |
| lysine decarboxylase, inducible | SK85_04470 | P0A9H4 | Negative | 4652102 - 4654249 | 81288.7 |
| lysine/cadaverine transporter | SK85_04471 | P0AAF0 | Negative | 4654329 - 4655663 | 46667.8 |
| transcriptional activator cadc | SK85_04472 | P23890 | Negative | 4656028 - 4656579 | 20639.6 |
| transposase | SK85_04473 | Not Available | Positive | 4656646 - 4656972 | 12644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





