Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator | SK85_04454 | P33234 | Negative | 4632799 - 4633560 | 29008.3 |
| biodegradative arginine decarboxylase | SK85_04455 | P28629 | Negative | 4633885 - 4636155 | 84561.0 |
| melibiose operon regulatory protein | SK85_04456 | P0ACH9 | Negative | 4636351 - 4637259 | 34929.9 |
| alpha-galactosidase | SK85_04457 | P06720 | Positive | 4637542 - 4638897 | 50659.9 |
| melibiose carrier protein | SK85_04458 | P02921 | Positive | 4639012 - 4640421 | 52221.0 |
| inner membrane protein yjdf | SK85_04459 | P39270 | Negative | 4640560 - 4641189 | 23443.4 |
| fumarate hydratase class i, anaerobic | SK85_04460 | P14407 | Negative | 4641312 - 4642958 | 60108.7 |
| anaerobic c4-dicarboxylate transporter dcub | SK85_04461 | P0ABP1 | Negative | 4643036 - 4644376 | 47938.2 |
| transcriptional regulatory protein dcur | SK85_04462 | P0AD02 | Negative | 4644947 - 4645666 | 27489.9 |
| sensor histidine kinase dcus | SK85_04463 | P0AEC9 | Negative | 4645663 - 4647294 | 60554.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





