Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex subunit phnb | SK85_04444 | P16681 | Negative | 4621229 - 4621672 | 16172.2 |
| phosphonoacetate hydrolase | SK85_04445 | P0AFJ3 | Negative | 4622030 - 4622365 | 12345.7 |
| clamp-binding protein crfc | SK85_04446 | P0DM85 | Positive | 4622766 - 4624994 | 84375.9 |
| hypothetical protein | SK85_04447 | P39267 | Positive | 4624991 - 4625869 | 32900.6 |
| proline/betaine transporter | SK85_04448 | P0C0L8 | Positive | 4626133 - 4627635 | 54849.1 |
| hypothetical protein | SK85_04449 | G3MTW7 | Positive | 4627747 - 4627836 | 3465.23 |
| sensor protein bass | SK85_04450 | P30844 | Negative | 4627812 - 4628912 | 41390.2 |
| transcriptional regulatory protein basr | SK85_04451 | P30843 | Negative | 4628913 - 4629581 | 25002.3 |
| phosphoethanolamine transferase epta | SK85_04452 | P30845 | Negative | 4629578 - 4631221 | 61686.6 |
| arginine/agmatine antiporter | SK85_04453 | P60063 | Negative | 4631325 - 4632662 | 46845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





