Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04414 | P0AF57 | Negative | 4592367 - 4593056 | 25066.4 |
| formate dehydrogenase h | SK85_04415 | Not Available | Negative | 4593150 - 4594829 | 62465.9 |
| formate dehydrogenase h | SK85_04416 | P07658 | Negative | 4594878 - 4595297 | 15310.5 |
| multidrug resistance outer membrane protein mdtp | SK85_04417 | P32714 | Negative | 4595495 - 4596961 | 53456.3 |
| multidrug resistance protein mdto | SK85_04418 | P32715 | Negative | 4596958 - 4599009 | 76155.1 |
| multidrug resistance protein mdtn | SK85_04419 | P32716 | Negative | 4599009 - 4600040 | 36910.3 |
| hypothetical protein | SK85_04420 | A5A630 | Negative | 4600059 - 4600334 | 10204.1 |
| alkyl sulfatase | SK85_04421 | P32717 | Negative | 4600543 - 4602528 | 73170.9 |
| d-allose kinase | SK85_04422 | P32718 | Negative | 4602801 - 4603730 | 33822.9 |
| d-allulose-6-phosphate 3-epimerase | SK85_04423 | P32719 | Negative | 4603714 - 4604409 | 26110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





