Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrabc system protein a | SK85_04394 | P0A698 | Negative | 4567334 - 4570156 | 103874.0 |
| single-stranded dna-binding protein | SK85_04395 | P0AGE2 | Positive | 4570410 - 4570946 | 18976.1 |
| inner membrane protein | SK85_04396 | P32700 | Negative | 4571045 - 4571326 | 10304.0 |
| signal transduction protein | SK85_04397 | P32701 | Positive | 4571756 - 4573342 | 60816.8 |
| regulatory protein soxs | SK85_04398 | P0A9E4 | Negative | 4573345 - 4573668 | 12911.6 |
| redox-sensitive transcriptional activator soxr | SK85_04399 | P0ACS3 | Positive | 4573754 - 4574218 | 17150.7 |
| permease | SK85_04400 | P0AF53 | Positive | 4574764 - 4576113 | 45714.4 |
| na+/h+ antiporter | SK85_04401 | P32703 | Positive | 4576264 - 4577913 | 60527.5 |
| pentapeptide repeat-containing protein | SK85_04402 | P32704 | Negative | 4578067 - 4579359 | 49339.1 |
| cation/acetate symporter actp | SK85_04403 | A7ZUU1 | Negative | 4579537 - 4581186 | 59200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





