Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna-dihydrouridine synthase a | SK85_04384 | Q8X5V6 | Positive | 4557934 - 4558971 | 38469.1 |
| phage shock protein g | SK85_04385 | P32696 | Positive | 4559105 - 4559347 | 9024.0 |
| quinone oxidoreductase 1 | SK85_04386 | P28304 | Negative | 4559513 - 4560496 | 35173.2 |
| replicative dna helicase | SK85_04387 | P0ACB0 | Positive | 4560579 - 4561994 | 52393.1 |
| alanine racemase, biosynthetic | SK85_04388 | P0A6B4 | Positive | 4562047 - 4563126 | 39155.2 |
| aromatic-amino-acid aminotransferase | SK85_04389 | P04693 | Positive | 4563379 - 4564572 | 43524.2 |
| hypothetical protein | SK85_04390 | P58036 | Negative | 4564911 - 4565297 | 14690.5 |
| class b acid phosphatase | SK85_04391 | P0AE22 | Positive | 4565699 - 4566412 | 26118.9 |
| hypothetical protein | SK85_04392 | P0AF49 | Positive | 4566523 - 4566939 | 15656.8 |
| hypothetical protein | SK85_04393 | P0AF51 | Positive | 4566943 - 4567299 | 13520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





