Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04374 | P32690 | Positive | 4546963 - 4548543 | 61152.8 |
| chorismate pyruvate-lyase | SK85_04375 | C5A132 | Positive | 4548766 - 4549263 | 18778.0 |
| 4-hydroxybenzoate octaprenyltransferase | SK85_04376 | A7ZUR2 | Positive | 4549276 - 4550148 | 32513.6 |
| glycerol-3-phosphate acyltransferase | SK85_04377 | A7ZUR3 | Negative | 4550303 - 4552726 | 91376.8 |
| diacylglycerol kinase | SK85_04378 | P0ABN3 | Positive | 4552897 - 4553265 | 13245.4 |
| lexa repressor | SK85_04379 | A7ZUR5 | Positive | 4553375 - 4553983 | 22359.1 |
| dna-damage-inducible protein f | SK85_04380 | P28303 | Positive | 4554056 - 4555381 | 47698.0 |
| stress response protein | SK85_04381 | P68207 | Positive | 4555497 - 4555706 | 8325.67 |
| zinc uptake regulation protein | SK85_04382 | P0AC51 | Negative | 4555748 - 4556263 | 19255.2 |
| hypothetical protein | SK85_04383 | P32694 | Positive | 4556581 - 4557573 | 37447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





