Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | SK85_04330 | B7UPF3 | Positive | 4492418 - 4493089 | 24673.9 |
| hypothetical protein | SK85_04331 | P32680 | Positive | 4493132 - 4493722 | 22613.9 |
| dna-binding protein hu-alpha | SK85_04332 | P0ACF2 | Positive | 4493909 - 4494181 | 9535.51 |
| hypothetical protein | SK85_04333 | P32681 | Positive | 4494254 - 4494889 | 23997.1 |
| zinc resistance-associated protein | SK85_04334 | P0AAB0 | Negative | 4494891 - 4495316 | 15200.3 |
| hypothetical protein | SK85_04335 | Not Available | Negative | 4495319 - 4495447 | 5024.87 |
| sensor protein zras | SK85_04336 | P14377 | Positive | 4495554 - 4496951 | 51034.9 |
| transcriptional regulatory protein zrar | SK85_04337 | P14375 | Positive | 4496948 - 4498273 | 48397.4 |
| phosphoribosylamine-glycine ligase | SK85_04338 | P15640 | Negative | 4498270 - 4499559 | 45943.0 |
| bifunctional purine biosynthesis protein purh | SK85_04339 | B7LAV3 | Negative | 4499571 - 4501160 | 57332.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





