Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein c | SK85_04320 | P27375 | Positive | 4483414 - 4483953 | 21132.2 |
| 2-iminoacetate synthase | SK85_04321 | P30140 | Negative | 4484363 - 4485496 | 43322.5 |
| thiazole synthase | SK85_04322 | C5A0T1 | Negative | 4485493 - 4486263 | 26897.7 |
| sulfur carrier protein this | SK85_04323 | O32583 | Negative | 4486265 - 4486465 | 7311.76 |
| sulfur carrier protein this adenylyltransferase | SK85_04324 | P30138 | Negative | 4486449 - 4487204 | 26985.4 |
| thiamine-phosphate synthase | SK85_04325 | A7ZUK8 | Negative | 4487197 - 4487832 | 23016.6 |
| phosphomethylpyrimidine synthase | SK85_04326 | B7M7Q3 | Negative | 4487832 - 4489727 | 70854.4 |
| stationary phase protein, binds sigma 70 rna polymerase subunit | SK85_04327 | A7ZUL0 | Negative | 4489960 - 4490436 | 18243.9 |
| nadh pyrophosphatase | SK85_04328 | A7ZUL1 | Positive | 4490531 - 4491304 | 29690.6 |
| uroporphyrinogen decarboxylase | SK85_04329 | A7ZUL3 | Positive | 4491344 - 4492408 | 39250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





