Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 4469382 - 4469457 | Not Available |
| elongation factor tu 2 | SK85_04311 | A8A779 | Positive | 4469572 - 4470756 | 43316.2 |
| protein translocase subunit sece | SK85_04312 | P0AG98 | Positive | 4470986 - 4471369 | 13644.3 |
| transcription termination/antitermination protein nusg | SK85_04313 | P0AFG1 | Positive | 4471371 - 4471916 | 20532.7 |
| 50s ribosomal protein l11 | SK85_04314 | A7ZUJ6 | Positive | 4472075 - 4472503 | 14876.2 |
| 50s ribosomal protein l1 | SK85_04315 | A7ZUJ7 | Positive | 4472507 - 4473211 | 24731.1 |
| 50s ribosomal protein l10 | SK85_04316 | A7ZUJ8 | Positive | 4473624 - 4474121 | 17712.6 |
| 50s ribosomal protein l7/l12 | SK85_04317 | A7ZUK0 | Positive | 4474188 - 4474553 | 12295.8 |
| dna-directed rna polymerase subunit beta | SK85_04318 | A7ZUK1 | Positive | 4474873 - 4478901 | 150641.0 |
| dna-directed rna polymerase subunit beta' | SK85_04319 | A7ZUK2 | Positive | 4478978 - 4483201 | 155169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





