Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna/tmrna (uracil-c(5))-methyltransferase | SK85_04297 | A7ZUI5 | Negative | 4455798 - 4456898 | 41969.3 |
| vitamin b12 transporter btub | SK85_04298 | P06129 | Positive | 4457267 - 4459111 | 68438.7 |
| glutamate racemase | SK85_04299 | C5A0R6 | Positive | 4459056 - 4459913 | 31003.7 |
| Trna-glu | Not Available | Not Available | Positive | 4462000 - 4462075 | Not Available |
| udp-n-acetylenolpyruvoylglucosamine reductase | SK85_04304 | P08373 | Positive | 4465685 - 4466713 | 37853.1 |
| bifunctional ligase/repressor bira | SK85_04305 | P06709 | Positive | 4466710 - 4467675 | 35304.1 |
| pantothenate kinase | SK85_04306 | A7ZUJ0 | Negative | 4467704 - 4468630 | 35400.6 |
| Trna-thr | Not Available | Not Available | Positive | 4469016 - 4469091 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4469100 - 4469184 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4469301 - 4469375 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





