Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor cytr | SK85_04267 | P0ACN9 | Negative | 4417100 - 4418125 | 37822.1 |
| primosomal protein n' | SK85_04268 | P17888 | Negative | 4418281 - 4420479 | 81640.5 |
| 50s ribosomal protein l31 | SK85_04269 | A7ZUF1 | Positive | 4420682 - 4420894 | 7871.49 |
| peptidoglycan peptidase | SK85_04270 | P32167 | Negative | 4420955 - 4421563 | 23140.9 |
| met repressor | SK85_04271 | A7ZUF7 | Negative | 4421747 - 4422064 | 12083.4 |
| cystathionine gamma-synthase | SK85_04272 | P00935 | Positive | 4422341 - 4423501 | 41552.8 |
| bifunctional aspartokinase/homoserine dehydrogenase 2 | SK85_04273 | P00562 | Positive | 4423504 - 4425921 | 88351.1 |
| 5,10-methylenetetrahydrofolate reductase | SK85_04274 | P0AEZ1 | Positive | 4426270 - 4427160 | 33094.5 |
| catalase-peroxidase | SK85_04275 | B1XBA8 | Positive | 4427489 - 4429669 | 80028.0 |
| permease | SK85_04276 | P0ABT9 | Positive | 4429762 - 4430667 | 32867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





