Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide-d-alanyl-d- alanine ligase | SK85_00084 | P11880 | Positive | 98027 - 99385 | 47449.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SK85_00085 | A7ZHH8 | Positive | 99379 - 100461 | 39891.2 |
| udp-n-acetylmuramoylalanine-d-glutamate ligase | SK85_00086 | P14900 | Positive | 100464 - 101780 | 46976.4 |
| lipid ii flippase ftsw | SK85_00087 | P0ABG6 | Positive | 101780 - 103024 | 45990.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | SK85_00088 | C4ZRI5 | Positive | 103021 - 104088 | 37817.0 |
| udp-n-acetylmuramate-l-alanine ligase | SK85_00089 | C4ZRI6 | Positive | 104142 - 105617 | 53629.2 |
| d-alanine-d-alanine ligase b | SK85_00090 | P07862 | Positive | 105610 - 106530 | 32841.6 |
| cell division protein ftsq | SK85_00091 | P06136 | Positive | 106532 - 107362 | 31435.6 |
| cell division protein ftsa | SK85_00092 | P0ABH2 | Positive | 107359 - 108621 | 45332.7 |
| cell division protein ftsz | SK85_00093 | P0A9A8 | Positive | 108682 - 109833 | 40326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





