Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-nadp reductase | SK85_04257 | P28861 | Negative | 4407395 - 4408141 | 27752.5 |
| fructose-1,6-bisphosphatase class 2 | SK85_04258 | P0A9D0 | Negative | 4408238 - 4409248 | 35854.6 |
| glycerol kinase | SK85_04259 | A7ZUE0 | Negative | 4409383 - 4410891 | 56233.9 |
| glycerol uptake facilitator protein | SK85_04260 | P0AER2 | Negative | 4410914 - 4411759 | 29781.7 |
| cell division protein zapb | SK85_04261 | B5YZ66 | Positive | 4412190 - 4412429 | 9403.08 |
| ribonuclease e (rnase e) inhibitor protein | SK85_04262 | A7ZUE4 | Negative | 4412514 - 4412999 | 17361.4 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SK85_04263 | P32166 | Negative | 4413092 - 4414018 | 33596.0 |
| atp-dependent protease atpase subunit hslu | SK85_04264 | P0A6H6 | Negative | 4414085 - 4415416 | 49596.7 |
| atp-dependent protease subunit hslv | SK85_04265 | A7ZUE7 | Negative | 4415426 - 4415956 | 19094.0 |
| cell division protein ftsn | SK85_04266 | P29131 | Negative | 4416049 - 4416903 | 31760.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





