Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous-iron efflux pump fief | SK85_04247 | A7ZUC8 | Positive | 4400138 - 4401040 | 32929.2 |
| hypothetical protein | SK85_04248 | Not Available | Negative | 4400986 - 4401090 | 3760.34 |
| 6-phosphofructokinase isozyme 1 | SK85_04249 | A7ZUC9 | Positive | 4401221 - 4402183 | 34844.2 |
| sulfate-binding protein | SK85_04250 | P0AG78 | Positive | 4402503 - 4403492 | 36661.2 |
| cdp-diacylglycerol pyrophosphatase | SK85_04251 | C5A085 | Positive | 4403599 - 4404354 | 28452.4 |
| triosephosphate isomerase | SK85_04252 | A7ZUD3 | Negative | 4404409 - 4405176 | 26973.3 |
| hypothetical protein | SK85_04253 | P32160 | Negative | 4405284 - 4405883 | 21706.1 |
| inner membrane protein | SK85_04254 | P0AF35 | Positive | 4405984 - 4406424 | 16542.6 |
| hypothetical protein | SK85_04255 | P32162 | Positive | 4406636 - 4406935 | 10776.7 |
| universal stress protein d | SK85_04256 | P0AAB8 | Positive | 4406962 - 4407390 | 16294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





