Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SK85_04227 | P32151 | Positive | 4379527 - 4380582 | 39296.3 |
| regulator | SK85_04228 | P32152 | Negative | 4380632 - 4382380 | 65998.6 |
| endo-1,4-beta-glucanase | SK85_04229 | P32153 | Negative | 4382380 - 4383450 | 38765.8 |
| fructose-like pts system eiibc component | SK85_04230 | P32154 | Negative | 4383440 - 4384891 | 51123.5 |
| fructose-like phosphotransferase enzyme iia component | SK85_04231 | P32155 | Negative | 4384902 - 4385348 | 16094.4 |
| transposase insc for insertion element is2 | SK85_04232 | Not Available | Positive | 4385711 - 4386076 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_04233 | Not Available | Positive | 4386034 - 4386939 | 34370.0 |
| l-rhamnose mutarotase | SK85_04234 | C5A069 | Negative | 4386985 - 4387299 | 12265.5 |
| rhamnulose-1-phosphate aldolase | SK85_04235 | C5A070 | Negative | 4387309 - 4388133 | 30147.2 |
| l-rhamnose isomerase | SK85_04236 | C5A071 | Negative | 4388393 - 4389652 | 47202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





