Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_04217 | Not Available | Positive | 4371374 - 4371481 | 3994.97 |
| transcriptional regulator | SK85_04218 | Q8X8C1 | Positive | 4371816 - 4372034 | 8408.23 |
| hypothetical protein | SK85_04219 | P0AFU6 | Positive | 4372252 - 4372494 | 9244.94 |
| hypothetical protein | SK85_04220 | Not Available | Positive | 4372494 - 4372676 | 6253.65 |
| protein fdhe | SK85_04221 | A8A6Z4 | Negative | 4372824 - 4373753 | 34690.5 |
| formate dehydrogenase, cytochrome b556(fdo) subunit | SK85_04222 | P0AEL2 | Negative | 4373750 - 4374385 | 24607.7 |
| formate dehydrogenase-o iron-sulfur subunit | SK85_04223 | P0AAJ6 | Negative | 4374382 - 4375284 | 33102.1 |
| formate dehydrogenase-o major subunit | SK85_04224 | Not Available | Negative | 4375297 - 4377711 | 89561.1 |
| formate dehydrogenase-o major subunit | SK85_04225 | P32176 | Negative | 4377760 - 4378347 | 21369.5 |
| protein fdhd | SK85_04226 | B7M697 | Positive | 4378541 - 4379374 | 30561.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





